Procedure
- Preheat Extraction Buffer at 60°C.
- Weigh 100 mg of fresh leaf tissue and grind it to powder in Liquid
Nitrogen in a chilled mortar and pestle.
- Add 0.5 ml of TE buffer to the tube.
- Centrifuge at 500 g for 10 min at room temperature.
- Remove the supernatant and wash the pellet twice with 0.5 ml Wash buffer
I.
- Finally suspend the pellet in 0.5ml Wash buffer II.
- Add 100 µg/ml Proteinase K to the above suspension.
- Add 1.0 ml pre warmed Extraction buffer.
- Incubate the sample at 60°C for 30 min with gentle shaking.
- Allow the sample to cool for 2 - 3 mins.
- Add 1.0 ml of Chloroform: Isoamyl Alcohol (24: 1) to the tube.
- Centrifuge at 12,000 X g at room temperature for 15 min.
- Transfer the upper aqueous phase to a new tube and repeat the process
twice or thrice.
- Transfer the upper aqueous phase to a new tube and add two volume of
cold 100% ethanol and 0.1 volume of 3 M Sodium acetate pH 5.2 to precipitate
the DNA.
- Incubate at -20°C for 4 – 5 hours or overnight for precipitation of DNA.
- Centrifuge at 12,000 X g for 10 min at 4°C to pellet the DNA.
- Wash the DNA pellet with 70% Ethanol.
- Centrifuge at 8000 X g for 5 min at 4°C to pellet the DNA.
- Repeat the washes twice or thrice.
-
Dry the pellet and resuspend the DNA pellet in 100 μl of TE.
Solutions
Wash Buffer I
50 mM Tris HCl pH 8.0
5 mM EDTA pH 8.0
50 mM NaCl
Wash Buffer II
50 mM Tris HCl pH 8.0
50 mM EDTA pH 8.0
Extraction Buffer
3% CTAB
1% (w/v) Sarkosyl
20 mM EDTA
1.4 M NaCl
0.1 M Tris HCl
1% (v/v) β-Mercaptoethanol
TE Buffer
10 mM Tris HCl pH 8.0
1 mM EDTA pH 8.0