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treatment buffer concentration - (Jun/09/2008 )

hi there!
i just need a confirmation whether treatment buffer concentration will effect the actual protein concentration that we load into gel? a little bit confusing since i need to load specific amount of protein in each well.
the treatment buffer (2X) mixture are consist of
2 ml glycerol
1.25 ml 1M Tris/Base pH 6.8
4 ml 10% SDS
1 ml B-merchapto
and few grains of bromophenol blue.
the buffer is diluted to 1X prior to use...

thank you... smile.gif

-xiehanz-

Our recipe is a little bit different (sucrose instead of glycerol) but the principle is the same. We use a 3x stock and add the ß-Mercaptoethanol (900 µL 3x + 100 µL ß-ME) just before using (it evaporates, so you can't store the buffer with ß-ME very long). If you dilute the sample buffer I guess you dilute it with your sample. You may get problems with the calculation if your protein concentration is very low, then it may be more appropriate to use a 3x buffer.

-jazim-

QUOTE (jazim @ Jun 10 2008, 04:14 AM)
... and add the ß-Mercaptoethanol (900 µL 3x + 100 µL ß-ME) just before using (it evaporates, so you can't store the buffer with ß-ME very long).

it stinks, it will ultimately oxidize and become useless (after a long time) but it doesn't evaporate from a capped vessel.

we make sample solution with 2-me and use it until it is all gone without significant loss of 2-me.

-mdfenko-

QUOTE (xiehanz @ Jun 9 2008, 10:49 PM)
hi there!
i just need a confirmation whether treatment buffer concentration will effect the actual protein concentration that we load into gel? a little bit confusing since i need to load specific amount of protein in each well.
the treatment buffer (2X) mixture are consist of
2 ml glycerol
1.25 ml 1M Tris/Base pH 6.8
4 ml 10% SDS
1 ml B-merchapto
and few grains of bromophenol blue.
the buffer is diluted to 1X prior to use...

thank you... smile.gif


Check out several recipes for treatment buffer blink.gif :
http://search.vadlo.com/b/q?sn=158621799&a...er%22&rel=0
..

-cellcounter-

thank you for the suggestion and help..i had continue with my recipies, and after transfer to membrane, i got the band of the proteins..so, it seems that, there are no effects of treatment buffer on protein concentration..perhaps...... smile.gif

-xiehanz-

I make 2X and never dilute to make 1X...

I use 20 ul of 2x + 20 ul of lysate. heat for 5 min at 95 degrees. add 20ul in Biorad apparatus wells.

-Curtis-