3D protein structure - (Aug/02/2007 )
Hi,
I am not used to dealing with 3d structures of protein, but i have an amino acid sequnce and would like to know of any free software that i can use to create a possible 3d structure.
Thanks
-Serenity-
Do you know the identity of the protein? If so, the PDB might well have a structure. Failing that, you should be able to model a structure.
Go to www.expasy.ch ,and look in the "Tools and software packages" section. There are a number of free protein threading applications.
Good luck
-swanny-
QUOTE (Serenity @ Aug 2 2007, 02:31 AM)
Hi,
I am not used to dealing with 3d structures of protein, but i have an amino acid sequnce and would like to know of any free software that i can use to create a possible 3d structure.
Thanks
I am not used to dealing with 3d structures of protein, but i have an amino acid sequnce and would like to know of any free software that i can use to create a possible 3d structure.
Thanks
Hi Serenity,
this link might help you:
http://www.ics.uci.edu/~baldig/index.html
you can analyze 3D cordinates using software Raswin. its free software.
good luck
-veerubiotech-