Protocol Online logo
Top : Forum Archives: : Molecular Cloning

Ratio 260/280 of a maxi-prep<1.6 - Purify a maxi-prep (Jan/23/2007 )

Dear all,
I made 6 maxi-preps using Qiagen Kit. I did the DNA quantification by spectrophotometry and the ratio 260/280 is very low between 1.4 and 1.6. How could it happened and what can I do to obtain a ratio up to 1.8?
Many thanks for your help.
Sev

-Severine-

Ok, how do you manage to do this?
Do you have an idea where the contamination come from?
Thanks

-Severine-

Sometimes when I get the 260/280 ratio less than 1.8, i would dilute maxi by adding lets say 100ul of water or TE and then check the ratio and it would b 1.7-1.9.

-scolix-

The problem is that I can't dilute my DNA because I need to be at 1ug/ul to do transfection after with specific quantityof plasmid and ratio.

-Severine-

Do you precipiate the maxi DNA after the maxi? (we routinely do this to get better OD). If not,

I would ethanol precipitate the maxi and dissolve in appropriate volumes and check the DNA concentration.

-scolix-

Ok, do you have a good protocol to advice me?
Many thanks for your help.

-Severine-

here is my protocol for precipitation

Add to the DNA

Na Acetate - (1/10th volume of DNA vol., eg. if 100ul of DNA add 10ul) and
Ethanol (100%,-20°C) (2.5x vol. of DNA vol.)

Vortex them throroughly.

Place in Dry ice for 2-5 min or
Place in –80°C Freezer for 2 hours or

Centrifuge for 30 min. at 4°C. Remove alcohol with out disturbing the pellet.

Add 200ul of 70% ethanol (-20°C) and centrifuge for 5 – 10 min. at 4°C.

Pipette out all the remaining alcohol

Centrifuge briefly for a few seconds and pipette out all the remaining liquid.

Add appropriate amounts of TE and wait for 2-5 min. for DNA pellet to dissolve

vortex (briefly) and centrifuge.

-scolix-