A databse linking SNPs to functional consequences? - To the protein (Sep/25/2009 )
What I am looking for is a database, where i enter a protein name/accession code etc. and out will pop a list of known amino acid variants as a result of SNPs, AND any causative consequences of these SNPs.
EG.
INPUT - ENZYME A
OUTPUT
E134V - 30% decrease in enzyme activity
E199X - No activity decrease
N455X - total loss of enzyme activity
Obviously this is a very general query and any sort of database which could be mined would be of use.
Cheers
-andy.dods6-
Try the Nucleic Acids Research online moleculr biology database collection: Here
-bob1-
bob1 on Sep 25 2009, 02:49 PM said:
Try the Nucleic Acids Research online moleculr biology database collection: Here
A fantastic resource, thanks very much.
F-SNP
http://compbio.cs.queensu.ca/F-SNP/
seems to be what I am after.
Thanks again
-andy.dods6-