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design pcr primers - (Aug/24/2005 )

hello, could anyone share some experience with me about how you designed your pcr primers that contain restriction site and point mutation(s) please? I am currently struggling to obtain a design that has good melting temperature (10 degrees above the extension tm) length within 45bps and capable of avoiding dimers and hairpin. Thank you very much.

-huotsing-

Hi,
I have little experience in primer design - just your basic really - sure it will be no news to you,
but I have found this great website that gives oyu a whole list of tools that might be able to help you...it is...

http://www.bioinformatics.vg/biolinks/bioi...520Design.shtml

Good luck

edwina

-edwina-

Oh, wow, that's very kind of you. Thank you in advance. I am going to check it out now. smile.gif

-huotsing-

QUOTE (huotsing @ Aug 24 2005, 05:41 PM)
Oh, wow, that's very kind of you. Thank you in advance. I am going to check it out now.  smile.gif


No worries
Hope it was some help!

smile.gif

-edwina-