Protocol Online logo
Top : Forum Archives: : Bioinformatics and Biostatistics

Nucleotides counting - Sequence (Jun/22/2005 )

Hi everybody!
maybe stupid question, but:
do you know any program where you can count your sequence downloaded (ncbi) from ORF - 1 etc. I need to have visible numbers after 10 or 100 nucleotides and formated.
It´s crazy to explain blink.gif - I mean
10 20
123 GCCAAGGACA GCCAAGGACA
124 134
246 GCCAAGGACA GCCAAGGACA

etc... biggrin.gif
really don´t want to count it by hand....

Thanx a lot!!!! rolleyes.gif

-Ell-

hi
whe using pDRAW32 (free software downloadable at http://www.acaclone.com/ you can enter a new sequence. After this, you can edit it and the programs show you the sequence annotated (number of bp, restriction sites...)
fred

-fred_33-

Hi Fred,
thanx a lot -my colleges were also pleased rolleyes.gif
Have a nice day + good luck in lab!
Ell

-Ell-