SNPs - (May/09/2008 )

What tools are there to predict if a SNP ( e.g. rs6001679) is in the coding region or nonoding region?

Thanks
SF

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http://genenformics.com/download.html

Download SnpSummary. Here is a sample output.

#SNPID TAXID CHROM_POS ALLELE GENE_ID GENE_SYMBOL SNP_GENE_POS
14317 9606 9:136470926 K 6256 RXRA mrna-utr
6001679 9606 22:38499871 K 150350 ENTHD1 intron

Good luck!

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I am using novoSNP (only work on window operation system) and it seem to me eases used. It is free also.

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