concentration of vector in ligation reaction - (Jul/29/2007 )
The vector which is used in ligation reaction should have a high concentration?? Is it true? If my vector is onle 5.5 microgram/ microliter, it still can be used in ligation reaction?
-Lucy Wong-
If the vector is really 5.5 micrograms, its a lot. You need to dilute it to use for ligation. For a normal ligation, I try to keep my total DNA (vector plus insert) around 30 ngs. For some I would go upto 200ng but this is rare.
-scolix-
QUOTE (Lucy Wong @ Jul 29 2007, 01:10 PM)
The vector which is used in ligation reaction should have a high concentration?? Is it true? If my vector is onle 5.5 microgram/ microliter, it still can be used in ligation reaction?
use 1:3 or 1: 5 ration of vector to insert. If blunt end ligation you use 1:10 ratio. You can still use your vector but you have to dillute your vector way down to 50ng/uL
QUOTE
-ahuja-
QUOTE (ahuja @ Jul 29 2007, 08:13 PM)
QUOTE (Lucy Wong @ Jul 29 2007, 01:10 PM)
The vector which is used in ligation reaction should have a high concentration?? Is it true? If my vector is onle 5.5 microgram/ microliter, it still can be used in ligation reaction?
use 1:3 or 1: 5 ration of vector to insert. If blunt end ligation you use 1:10 ratio. You can still use your vector but you have to dillute your vector way down to 50ng/uL
QUOTE
sorry....typing mistake: the concentration should be 5.5 nanogram/microliter
-Lucy Wong-
QUOTE (Lucy Wong @ Jul 30 2007, 12:52 AM)
sorry....typing mistake: the concentration should be 5.5 nanogram/microliter
Well, Normally I would use 20-30 ng of vector. Here, I would simply use 4 ul of the vector for ligation.
Good Luck !!!
-scolix-