Gene screening - (Jul/23/2009 )

Hey all,

Yet again I have a problem... I am screening a gene panel of around 40 exons and I keep getting told the way Im annotatin the changes is wrong. I was wondering if anyone knew where I could get the rules from so that I can make my notes in the proper format?

Thanks in advance for your help.

Kami23 on Jul 23 2009, 03:04 AM said:

You need to use the exon prediction or Gene structure prediction tools.

At the end, you may also have to check manually using GT/AG rule.

NCBI Gene gives you precise gene structure most of the times. So check it out too.

cellcounter on Aug 4 2009, 05:25 PM said:

Hmm I dont think i explained myself very well.... for example if i wanted to say I had a SNP 512 bp from the ATG how would i write that in a universally accepted form?