3d structure - (May/08/2009 )

hi
i have amino acid sequence. i want to predic 3d structure of amino acid with program that all of u recommend. help me plz...
thanks

Hey,

Try threading using genthreader to get structural homologues.
http://bioinf.cs.ucl.ac.uk/psipred/psiform.html
Go for fold recognition.

Best,
TC

MOFT on May 9 2009, 01:39 AM said:

T C on May 8 2009, 10:01 PM said:

PSIPRED doesn't do the prediction - it simple finds folds.

try here: http://salilab.org/modeller/

MOFT on May 8 2009, 12:09 PM said:

You can use swiss protpdb viewer its easy to use

MOFT on May 8 2009, 11:09 AM said:

You can try out many protein structure prediction tools.

Hi
You may have a look at JPred or PredictProtein.

Best Luck !!
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