Insert direction in TA cloning - (Jan/11/2015 )
HI
I am a little confused about the TA cloning. when we clone an insert in TA cloning vectors which have an overhang T on their 5 site, are all the inserts in 5 to 3 direction or still there is the possibility that the insert orientation be in reverse like what we have in single enzyme cloning?
Cheers
-sara.r-
They can insert in either direction.
-bob1-
The reason is that both ends of your dsDNA fragment have a 5' end, and a 5' A is added to both ends. You just tend not to think so much about the other strand of the dsDNA, and are biased in your thinking in a way in which the chemical reaction is not.
-phage434-