Prediction tool to search for translation start codon - (Jan/14/2014 )
HI all,
I need an easy-to-use, web-based free Prediction tool to search for eukaryotic translation start codon from nucleotide sequence.
I want a tool that can find canonical start codon ATG as well as alternative codons such as CTG.
Can anyone suggest me good tool? Thanks!
-cancerous-
I don't know if most of them can find alternative start codons, but most sequence analysis tools can do this. I use ApE (A plasmid Editor) which is free (though not web based).
Also have a look at the tools here
-bob1-
you may also find a web based tool at expasy.org/genomics (maybe codon suite?).
-mdfenko-