are they non-specific band? - (May/26/2013 )
I am student and I did a PCR. The expected band size is 181bp. And I found that there is a fade band below my expected band. Are they non-specific bands? or degradation? Thx
-man121-
The lower bands appear to me to be specific bands, they could be an isoform of the gene. What kind of PCR (gDNA or cDNA) are you doing?
-pcrman-
It is gDNA, how could I avoid it?
-man121-
So what have you done to optimise the reaction?
-bob1-
It might be worth checking the melting plots to confirm its a specific band; there will likely be a second smaller peak near the main peak.
-JoeSus-