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Is there any software that can be sued to design degenerate primers - (Sep/21/2010 )

I know how to design primer using software such as primer3. But how do i design degen primers based on conserve amino acid sequence of several species? Do i have to do it manually?

-hianghao-

Have you tried Genefisher or CODEHOP? (both found googling "degenerate primer design")

-Trof-