Literature for finding a gene-specific promoter? - (May/21/2008 )
Can anyone give me citations for reviews that cover this problem, or even specific papers dedicated to looking for a promoter for a specific gene? In general, how difficult is it to find promoters for one's gene of interest?
-brightfield-
QUOTE (brightfield @ May 21 2008, 06:39 AM)
Can anyone give me citations for reviews that cover this problem, or even specific papers dedicated to looking for a promoter for a specific gene? In general, how difficult is it to find promoters for one's gene of interest?
This generally involves scanning relevant literature to find one that people have reliably used for that particular tissue or for that time. I sure hope somebody makes a database of such promoters. There are databases for cre- mice made under different promoters, it may help if you are working on mice.
-cellcounter-
try these links
https://bioinformatics.oxfordjournals.org/c...stract/15/7/607
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/322
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/266
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/114
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/328
https://www.liebertonline.com/doi/abs/10.10...623103322452378
-desertrose-
QUOTE (cellcounter @ May 21 2008, 11:22 AM)
QUOTE (brightfield @ May 21 2008, 06:39 AM)
Can anyone give me citations for reviews that cover this problem, or even specific papers dedicated to looking for a promoter for a specific gene? In general, how difficult is it to find promoters for one's gene of interest?
This generally involves scanning relevant literature to find one that people have reliably used for that particular tissue or for that time. I sure hope somebody makes a database of such promoters. There are databases for cre- mice made under different promoters, it may help if you are working on mice.
I'm actually working with avians, so I think it's much tougher. I do agree the best strategy is to find ones that have already been cloned.
-brightfield-
QUOTE (desertrose @ May 21 2008, 11:41 AM)
try these links
https://bioinformatics.oxfordjournals.org/c...stract/15/7/607
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/322
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/266
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/114
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/328
https://www.liebertonline.com/doi/abs/10.10...623103322452378
https://bioinformatics.oxfordjournals.org/c...stract/15/7/607
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/322
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/266
https://nar.oxfordjournals.org/cgi/content/abstract/31/1/114
https://nar.oxfordjournals.org/cgi/content/abstract/30/1/328
https://www.liebertonline.com/doi/abs/10.10...623103322452378
Thanks, these tools look useful.
-brightfield-
https://scholar.google.com.eg/scholar?hl=en...lar.google.com/
-desertrose-