southern hybridization temperature - (Mar/14/2005 )
hi,every professional,
   now i wanna pursue a low stringency southern hybridizaion. the probe is ~1kb and with nearly only 70% homology with the target DNA.
   how can i decide the hybridization temperature?
   thanks.
-lexA-
hi
as you get only 70%homology with your target, i would first try a room temperature assay...
-fred_33-
thank you  
 but  RT? can the double strand denature and accomplish hybridization successfully in such low temperature?
and do you mean i have to try a temperature grads?
-lexA-
